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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015789574.1_cds_XP_016497095.1_1056
CDS Infomation

[gene=LOC107815956] [db_xref=GeneID:107815956] [protein=vacuolar cation/proton exchanger 3-like] [protein_id=XP_016497095.1] [location=join(29264..29270,29761..29804,31305..31568,31644..31711,32089..32117,32948..33144,33277..33489,33697..33831,34089..34205,34286..34339,34648..34764,35147..35243,35565..35593)] [gbkey=CDS]
Sequence

ATGGCCGTGAATGATAATTCGCATTTTACAGGAGCGAAGTCCCATCTTGAAATGGGATCA
TCAGAGGGAAGAGCAGTACTTCAGCTTGAGGATGAGGACCTTGTCAGATCTGAGCATTTT
GATAGAAAGACATCTTCTTCGGGCGCCGCTCCTCAAGGATCTTCTTATGATGTTGAGGAA
GATGATGACAGTCCTAAAAGTATATTGAATAGCATACGAAAAAATATTCAGATTGTTTTT
TTCTCCAACAAGTTAAACATACTTGTACCTTGTGGACCTTTAGCCATAGTTGTCAATGAG
TTAACTGATCATCACGGATGGATCTTCATACTTAGCTTGTTAGGCATCATTCCCCTCGCA
GAGCGTTTAGGTTGGGCCACAGAGCAGCTGGCTTTTTATACTGGACCTACAGTTGGAGGA
CTTTTAAATGCAACCTTTGGAAATGCAACAGAGTTAATAATTTCAATGTATGCTCTGAAA
AGTGGCATGATTCGTGTGGTGCAGCAATCACTATTGGGCTCCATTCTGTCCAATACTTTA
CTAGTGCTTGGATGTGCATTTTTTGGTGGTGGCATTATTCATTCTAATAAGGAGCAGGTT
TTCAACAAGGGAACTGCAGTGATGAATTCAGGGTTGCTTTTAATGGCAGTTATGTGCTTG
CTGTTCCCTGCTGTCCTCCACGTTACACACACTGAAGTGCATTTTGGGAAGTCAGTGTTG
GCGCTTTCCAGATTTAGCAGCTGCATTATGCTTGTAGCATATGGGGCATATCTATTTTTT
CAGCTGACAAACCAAAAGAATCTTTACATGCCAATGGCTGAGGAAGAGGATCAGATTGAT
GGGAGTTCAGATAATGAAGAAGCTCCCGAGATATCAAAATGGGGCTCAATCCTATGGCTC
TCTGTTATGACACTATGGATAGCAGTCTTGTCAGAGTACCTAGTCAATACCATAGAGGGG
GCGTCTGTTGCAATGGATATTCCTGTAGCATTTATAAGTGTGATACTGCTCCCGATTGTT
GGAAACGCCGCTGAGCATGCTGGAGCTGTCATGTTTGCTGTCAAAGACAAGCTTGACATA
TCTTTGGGAGTGGCAATAGGCTCATCAACACAGATAGCCATGTTTGGGATCCCATTCTCT
GTTGTAGTTGGATGGATAATAGGGTGTCCTATGAACTTGGACTTCCAAATGTTTGAAACA
GCCACACTTCTAATGACTGTTCTTGTTGTAGCATTCATGCTGCAGGACGGAAATTCTAAT
TACTTTAAAGGGCTGATGCTCCTTCTCTGCTATCTTATAGTTGCTGCAAGTTTCTTTGTA
CATATAGATCCAGAGTCTATACAGGACAAGCCCAGAAAACATAATGGCTAA

Peptide Sequence

PEP ID

XP_016497095.1
PEP Infomation

PREDICTED: vacuolar cation/proton exchanger 3-like [Nicotiana tabacum]
Sequence

MAVNDNSHFTGAKSHLEMGSSEGRAVLQLEDEDLVRSEHFDRKTSSSGAAPQGSSYDVEE
DDDSPKSILNSIRKNIQIVFFSNKLNILVPCGPLAIVVNELTDHHGWIFILSLLGIIPLA
ERLGWATEQLAFYTGPTVGGLLNATFGNATELIISMYALKSGMIRVVQQSLLGSILSNTL
LVLGCAFFGGGIIHSNKEQVFNKGTAVMNSGLLLMAVMCLLFPAVLHVTHTEVHFGKSVL
ALSRFSSCIMLVAYGAYLFFQLTNQKNLYMPMAEEEDQIDGSSDNEEAPEISKWGSILWL
SVMTLWIAVLSEYLVNTIEGASVAMDIPVAFISVILLPIVGNAAEHAGAVMFAVKDKLDI
SLGVAIGSSTQIAMFGIPFSVVVGWIIGCPMNLDFQMFETATLLMTVLVVAFMLQDGNSN
YFKGLMLLLCYLIVAASFFVHIDPESIQDKPRKHNG

Transcript Sequence

Gene sequence data has not been registered.